Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6900

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385070 to 387138 15267 mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387700 to 389910 15268 mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390201 to 390814 15269

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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386,738 + 15267 mRNA_6899 0.81 0.6
387,089 + -0.2
387,178 - -1.7
387,185 - 0.3
387,199 - 0.8
387,235 + -0.8
387,247 + 0.2
387,248 + -0.0
387,248 - -0.3
387,254 - -0.8
387,260 - -1.5
387,262 - 0.4
387,264 - -1.4
387,264 - 2.9
387,272 + 0.3
387,281 + -1.0
387,291 - 0.4
387,301 - 0.7
387,306 + 0.2
387,309 - -0.8
387,309 - -1.3
387,309 + -0.9
387,314 + -2.2
387,341 - 0.7
387,353 - 0.2
387,361 + -0.5
387,466 - 0.3
387,516 + 0.0
387,517 + 0.4
387,517 + 0.1
387,528 - -0.4
387,541 + -0.6
387,566 - -0.6
387,751 - 2.6
387,830 + -0.8
387,936 - 15268 mRNA_6900 0.11 -1.0
387,951 + 15268 mRNA_6900 0.11 1.6
388,142 - 15268 mRNA_6900 0.20 -4.3
388,382 - 15268 mRNA_6900 0.31 2.0
388,424 - 15268 mRNA_6900 0.33 -1.7
388,853 + 15268 mRNA_6900 0.52 0.5
389,274 + 15268 mRNA_6900 0.71 1.4
389,583 + 15268 mRNA_6900 0.85 0.6
390,042 - 0.5
390,132 - -1.4
390,446 - 15269 mRNA_6901 0.40 -0.5
390,898 + -0.7