Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6899

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6898: 15266 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833, at 383747 to 384768 15266 mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385070 to 387138 15267 mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387700 to 389910 15268

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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384,097 + 15266 mRNA_6898 0.34 2.3
384,250 + 15266 mRNA_6898 0.49 -0.1
384,255 - 15266 mRNA_6898 0.50 0.7
384,269 + 15266 mRNA_6898 0.51 -1.3
384,838 + 0.4
384,997 + 2.3
385,151 - 0.9
385,300 + 15267 mRNA_6899 0.11 -0.1
385,305 + 15267 mRNA_6899 0.11 2.0
385,557 + 15267 mRNA_6899 0.24 0.9
385,579 + 15267 mRNA_6899 0.25 -0.5
385,614 + 15267 mRNA_6899 0.26 0.6
386,011 - 15267 mRNA_6899 0.45 1.8
386,306 - 15267 mRNA_6899 0.60 0.5
386,738 + 15267 mRNA_6899 0.81 0.6
387,089 + -0.2
387,178 - -1.7
387,185 - 0.3
387,199 - 0.8
387,235 + -0.8
387,247 + 0.2
387,248 + -0.0
387,248 - -0.3
387,254 - -0.8
387,260 - -1.5
387,262 - 0.4
387,264 - -1.4
387,264 - 2.9
387,272 + 0.3
387,281 + -1.0
387,291 - 0.4
387,301 - 0.7
387,306 + 0.2
387,309 - -0.8
387,309 - -1.3
387,309 + -0.9
387,314 + -2.2
387,341 - 0.7
387,353 - 0.2
387,361 + -0.5
387,466 - 0.3
387,516 + 0.0
387,517 + 0.4
387,517 + 0.1
387,528 - -0.4
387,541 + -0.6
387,566 - -0.6
387,751 - 2.6
387,830 + -0.8
387,936 - 15268 mRNA_6900 0.11 -1.0
387,951 + 15268 mRNA_6900 0.11 1.6