Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6879

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339326 to 341674 15247 mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342593 to 344205 15248

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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338,375 - 0.8
338,453 - 0.4
338,617 - -1.1
338,641 - 0.6
338,654 - -3.0
338,971 - -0.3
339,224 + 0.4
339,566 + 15247 mRNA_6879 0.10 1.1
339,674 + 15247 mRNA_6879 0.15 0.6
339,816 - 15247 mRNA_6879 0.21 1.1
340,179 - 15247 mRNA_6879 0.36 -0.5
340,301 - 15247 mRNA_6879 0.42 0.8
340,412 - 15247 mRNA_6879 0.46 0.8
340,830 - 15247 mRNA_6879 0.64 0.5
341,164 - 15247 mRNA_6879 0.78 1.2
341,289 + 15247 mRNA_6879 0.84 0.7
341,413 - 15247 mRNA_6879 0.89 -0.2
341,444 + 0.4
341,596 + -0.0
341,607 - -0.4
341,730 - -0.4
341,741 + -0.1
341,752 - -0.3
341,756 + -1.4
341,904 + 0.1
342,053 + -0.5
342,058 + -2.5
342,188 - -0.5
342,188 - -0.7
342,195 + -1.3
342,198 - 1.4
342,211 + -0.9
342,233 + -2.0
342,347 + 1.7
342,347 + -0.8
342,357 - 0.6
342,361 - -0.1
342,371 + -0.1
342,508 - -0.4
342,533 + -0.1
342,636 - -1.0
342,660 + -1.1