Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6834

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231692 to 232700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233665 to 235762 15202 mRNA_6835: 15203 - Hypothetical Protein, at 236231 to 236767 15203

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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232,680 - -1.2
232,831 - 0.8
232,964 - 0.4
233,152 - -0.1
233,304 + 0.0
233,411 + -1.3
233,442 - -0.8
233,464 + 0.7
233,485 - -0.2
233,513 + 2.8
233,534 - 0.3
233,722 - 0.2
233,742 + -0.7
233,742 + -1.4
233,906 - 15202 mRNA_6834 0.11 -0.5
234,045 - 15202 mRNA_6834 0.18 0.2
234,048 + 15202 mRNA_6834 0.18 0.4
234,354 + 15202 mRNA_6834 0.33 -1.8
234,884 - 15202 mRNA_6834 0.58 -0.2
234,889 + 15202 mRNA_6834 0.58 1.0
234,907 - 15202 mRNA_6834 0.59 0.1
234,908 + 15202 mRNA_6834 0.59 0.1
235,152 - 15202 mRNA_6834 0.71 -0.2
235,208 - 15202 mRNA_6834 0.74 -0.1
235,213 + 15202 mRNA_6834 0.74 0.2
235,217 + 15202 mRNA_6834 0.74 -0.6
235,217 + 15202 mRNA_6834 0.74 0.6
235,482 - 15202 mRNA_6834 0.87 -1.9
235,496 - 15202 mRNA_6834 0.87 -0.6
235,612 - 0.5
235,793 - -0.2
236,026 + -1.0
236,086 + -3.9
236,202 + 1.1
236,224 - -0.4
236,267 + -1.3
236,397 - 15203 mRNA_6835 0.31 -1.5
236,526 - 15203 mRNA_6835 0.55 -1.1
236,604 + 15203 mRNA_6835 0.69 0.7
236,621 + 15203 mRNA_6835 0.73 -0.7
236,621 + 15203 mRNA_6835 0.73 0.9
236,629 + 15203 mRNA_6835 0.74 -0.1
236,636 + 15203 mRNA_6835 0.75 1.3
236,687 - 15203 mRNA_6835 0.85 0.3
236,694 + 15203 mRNA_6835 0.86 1.4
236,710 - 15203 mRNA_6835 0.89 -0.3