Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6804

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172404 to 173557 15171 mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173731 to 174873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174992 to 176183 15173

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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172,859 + 15171 mRNA_6803 0.39 0.7
172,870 - 15171 mRNA_6803 0.40 1.1
173,001 + 15171 mRNA_6803 0.52 -0.3
173,129 + 15171 mRNA_6803 0.63 1.6
173,163 + 15171 mRNA_6803 0.66 0.7
173,273 - 15171 mRNA_6803 0.75 1.7
173,436 + 15171 mRNA_6803 0.89 0.1
173,439 - 15171 mRNA_6803 0.90 2.4
173,604 - 1.7
173,712 - -0.1
173,750 + 0.4
173,769 - -0.2
173,769 + -1.6
173,769 - 0.6
173,770 + -3.5
173,770 - 0.2
173,771 - 0.4
173,778 + -1.9
173,784 + -0.9
173,784 - 1.3
173,791 + -1.1
173,793 + -0.4
173,905 - 15172 mRNA_6804 0.15 -1.1
173,915 - 15172 mRNA_6804 0.16 0.0
173,916 - 15172 mRNA_6804 0.16 0.3
173,928 + 15172 mRNA_6804 0.17 -0.0
173,953 + 15172 mRNA_6804 0.19 -0.0
173,974 + 15172 mRNA_6804 0.21 -0.1
174,101 + 15172 mRNA_6804 0.32 0.6
174,342 - 15172 mRNA_6804 0.53 0.0
174,637 + 15172 mRNA_6804 0.79 -1.7
174,640 - 15172 mRNA_6804 0.80 -0.2
174,658 + 15172 mRNA_6804 0.81 0.4
174,749 + 15172 mRNA_6804 0.89 0.5
174,755 + 15172 mRNA_6804 0.90 -1.4
175,006 + 0.1
175,139 + 15173 mRNA_6805 0.12 0.3
175,378 + 15173 mRNA_6805 0.32 0.4
175,381 - 15173 mRNA_6805 0.33 2.0
175,460 + 15173 mRNA_6805 0.39 -0.2
175,841 + 15173 mRNA_6805 0.71 0.3