Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6799

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163328 to 165722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165891 to 167581 15168

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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162,373 + -4.4
162,379 - 1.5
162,390 + 0.3
162,834 - 1.1
162,982 - 0.2
163,131 + 0.0
164,246 - 15167 mRNA_6799 0.38 -0.9
165,778 + 2.4
165,791 - 1.2
165,791 - -2.3
165,812 - 0.5
165,824 - 0.1
165,825 - 2.6
165,825 - 0.3
165,828 + 0.3
165,910 - -0.7
166,306 + 15168 mRNA_6800 0.25 0.3
166,574 - 15168 mRNA_6800 0.40 -1.4
166,583 + 15168 mRNA_6800 0.41 -1.9