Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6797

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6796: 15164 - Hypothetical Protein, at 155550 to 156068 15164 mRNA_6797: 15165 - BLAST Formin-like protein 3 [Rhizoctonia solani], at 156306 to 160746 15165 mRNA_6798: 15166 - Hypothetical Protein, at 161336 to 161885 15166

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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155,324 - -0.5
155,337 + -1.2
155,446 + 0.5
155,462 - -0.7
155,481 + 2.4
155,498 + 2.0
155,626 - 15164 mRNA_6796 0.15 1.0
155,632 - 15164 mRNA_6796 0.16 1.9
155,646 - 15164 mRNA_6796 0.18 2.7
155,651 + 15164 mRNA_6796 0.19 1.1
155,708 - 15164 mRNA_6796 0.30 0.3
155,754 - 15164 mRNA_6796 0.39 -0.9
155,771 - 15164 mRNA_6796 0.43 -0.5
155,773 + 15164 mRNA_6796 0.43 -0.4
155,774 - 15164 mRNA_6796 0.43 -0.2
155,778 - 15164 mRNA_6796 0.44 0.4
155,784 + 15164 mRNA_6796 0.45 0.6
155,795 + 15164 mRNA_6796 0.47 0.0
155,795 + 15164 mRNA_6796 0.47 1.4
155,799 + 15164 mRNA_6796 0.48 -2.2
155,809 + 15164 mRNA_6796 0.50 0.7
155,811 + 15164 mRNA_6796 0.50 2.3
155,822 - 15164 mRNA_6796 0.52 -0.1
155,916 - 15164 mRNA_6796 0.71 -2.6
155,938 - 15164 mRNA_6796 0.75 -0.4
155,943 - 15164 mRNA_6796 0.76 0.0
155,953 - 15164 mRNA_6796 0.78 0.2
155,963 + 15164 mRNA_6796 0.80 -3.1
156,099 - 0.4
156,108 + 1.1
156,117 - 0.1
156,410 + 1.5
156,498 - 0.2
156,519 - 1.4
156,679 - -1.1
156,679 - 0.8
156,918 + 15165 mRNA_6797 0.14 0.3
156,919 - 15165 mRNA_6797 0.14 0.5
156,921 + 15165 mRNA_6797 0.14 -0.9
157,228 - 15165 mRNA_6797 0.21 -0.4
157,256 - 15165 mRNA_6797 0.21 0.2
157,410 - 15165 mRNA_6797 0.25 0.7
157,670 - 15165 mRNA_6797 0.31 -0.7
157,966 - 15165 mRNA_6797 0.37 -0.4
158,738 + 15165 mRNA_6797 0.55 -3.5
159,110 + 15165 mRNA_6797 0.63 0.0
159,436 - 15165 mRNA_6797 0.70 2.1
159,605 + 15165 mRNA_6797 0.74 0.7
159,732 + 15165 mRNA_6797 0.77 0.9
159,961 - 15165 mRNA_6797 0.82 0.4
160,150 + 15165 mRNA_6797 0.87 0.2
160,230 + 15165 mRNA_6797 0.88 1.9
160,238 + 15165 mRNA_6797 0.89 -2.2
160,268 + 15165 mRNA_6797 0.89 -0.3
160,341 + 0.2
160,418 - 0.0
160,438 - -1.3
160,467 - -1.1
160,524 + -1.8
160,557 - 1.7
160,630 - -3.6
160,647 + 1.4
160,705 - -0.3
160,710 + 0.2
160,731 - -0.2
160,731 - 0.2
160,742 - -0.6
160,781 - -2.3
160,830 - -1.6
160,870 + -0.8
160,923 - 2.4
160,960 - 0.9
160,961 - -0.1
160,968 + -0.4
161,004 - -0.1
161,018 + 0.5
161,039 - -0.9
161,058 - -0.1
161,085 - 1.0
161,100 - 1.1
161,104 + -0.1
161,105 - -0.9
161,108 + 0.4
161,109 - 0.5
161,117 + 1.9
161,117 - -0.9
161,120 - 1.3
161,120 - -0.9
161,144 + -0.3
161,149 - 0.5
161,187 - 0.6
161,187 - 0.5
161,188 + -1.0
161,202 - 2.2
161,207 + 0.4
161,210 + 0.1
161,213 + -0.6
161,224 - 0.1
161,224 - 0.0
161,228 - 1.8
161,229 + 0.3
161,235 - -0.8
161,249 - -0.4
161,249 - -2.0
161,250 + -1.2
161,251 + 0.3
161,254 + 0.5
161,254 + 0.3
161,254 + -0.8
161,256 - -0.9
161,257 + -1.6
161,261 - -0.4
161,263 + 0.4
161,264 + 0.7
161,264 + -1.5
161,272 + -0.6
161,275 + 1.0
161,278 - 2.0
161,280 - -1.7
161,302 + 0.6
161,311 - 0.2
161,333 + -1.8
161,402 - 15166 mRNA_6798 0.12 0.5
161,416 - 15166 mRNA_6798 0.15 -1.7
161,424 + 15166 mRNA_6798 0.16 -0.6
161,427 - 15166 mRNA_6798 0.17 -1.1
161,431 - 15166 mRNA_6798 0.17 -0.1
161,462 - 15166 mRNA_6798 0.23 -0.9
161,565 + 15166 mRNA_6798 0.42 1.0
161,642 + 15166 mRNA_6798 0.56 -0.3