Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6791

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133483 to 136016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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136,054 - 0.5
136,066 - -0.2
136,069 - -1.2
136,071 + 0.5
136,079 + -0.7
136,093 + -0.4
136,093 + 0.2
137,994 - 15159 mRNA_6791 0.26 -1.3
138,144 + 15159 mRNA_6791 0.28 1.5
139,098 - 15159 mRNA_6791 0.41 -0.1
143,407 + 0.1
143,850 - 15160 mRNA_6792 0.13 0.6
143,906 + 15160 mRNA_6792 0.19 0.3
144,023 + 15160 mRNA_6792 0.31 0.4
144,186 + 15160 mRNA_6792 0.48 0.1