Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6785

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6784: 15152 - Hypothetical Protein, at 122179 to 122986 15152 mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123273 to 125638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125988 to 127224 15154

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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122,682 + 15152 mRNA_6784 0.62 0.7
122,831 - 15152 mRNA_6784 0.81 -1.6
122,985 + -0.1
123,086 - 1.0
123,114 - -0.3
123,128 - -2.0
123,911 + 15153 mRNA_6785 0.27 0.2
123,973 - 15153 mRNA_6785 0.30 -0.3
124,162 + 15153 mRNA_6785 0.38 0.3
124,471 - 15153 mRNA_6785 0.51 -1.1
124,498 + 15153 mRNA_6785 0.52 0.3
124,572 - 15153 mRNA_6785 0.55 0.1
124,760 + 15153 mRNA_6785 0.63 1.1
125,152 - 15153 mRNA_6785 0.79 0.7
125,159 + 15153 mRNA_6785 0.80 -0.2
125,339 + 15153 mRNA_6785 0.87 1.9
125,447 + -1.2
125,736 + 1.2
125,764 - -1.4
125,790 - -1.3
125,793 - -0.8
125,918 - 0.3
125,920 - 0.7
125,933 - 0.6
125,956 + 0.6
126,080 - 0.2
126,083 - 0.3
126,084 + 0.1
126,108 + 0.4
126,111 + -0.1
126,527 - 15154 mRNA_6786 0.44 -0.8