Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6757

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6756: 15124 - K02906 RP-L3, MRPL3, rplC large subunit ribosomal protein L3, at 67016 to 68273 15124 mRNA_6757: 15125 - K11838 USP7, UBP15 ubiquitin carboxyl-terminal hydrolase 7, at 68694 to 73091 15125 mRNA_6758: 15126 - HMMPfam-Beta-lactamase-PF00144,SUPERFAMILY--SSF56601, at 73895 to 75434 15126

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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68,334 + -0.7
68,431 - 0.5
68,439 + -0.9
68,462 - -0.2
68,464 + 0.7
68,474 - 0.3
68,479 + -1.0
68,480 - 0.9
68,480 - -1.9
68,483 + -0.8
68,486 + -2.7
68,489 + -0.8
68,493 + -0.2
68,499 + 0.3
68,636 + 0.4
69,086 - -1.0
72,552 + 15125 mRNA_6757 0.88 0.5
73,181 - 1.3
73,299 + -1.6
73,409 - -0.2
73,410 - -1.0
73,415 + -0.6
73,422 + -1.6
73,422 + -2.6
73,466 + -0.3
73,544 + 0.5
73,554 - 0.4
73,555 + -0.5
73,567 - -0.1