Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6743

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6742: 15110 - Hypothetical Protein, at 41325 to 41801 15110 mRNA_6743: 15111 - K06671 STAG1_2, SCC3, IRR1 cohesin complex subunit SA-1/2, at 41896 to 46673 15111 mRNA_6744: 15112 - KOG0813 Glyoxylase, at 46801 to 48312 15112

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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40,909 + 0.9
40,911 - -1.1
40,923 - 0.0
43,833 - 15111 mRNA_6743 0.41 -0.4
46,087 - 15111 mRNA_6743 0.88 -0.1
46,122 - 15111 mRNA_6743 0.88 0.3
46,230 - 0.3
46,423 + 0.6
46,626 - 1.2
46,636 + 0.1
46,656 - -0.8
46,684 + -0.6
46,803 + 0.1
46,901 + -3.3
47,134 + 15112 mRNA_6744 0.22 0.0
47,248 + 15112 mRNA_6744 0.30 1.2