Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6739

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6737: 15105 - KOG0516 Dystonin, GAS (Growth-arrest-specific protein), and related proteins, at 29328 to 32887 15105 mRNA_6738: 15106 - Hypothetical Protein, at 32978 to 33241 15106 mRNA_6739: 15107 - BLAST polysaccharide lyase family 14 protein [Mixia osm..., at 33495 to 35587 15107

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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32,507 - 15105 mRNA_6737 0.89 0.7
32,608 + 1.1
32,639 + -2.6
32,639 + -1.4
32,642 - -1.0
32,642 - 2.9
32,677 - 0.8
32,687 + -0.3
32,687 + 0.3
32,737 - -0.4
32,738 + 2.2
32,777 + 1.8
32,839 - 2.5
33,105 - 15106 mRNA_6738 0.48 0.3
33,228 - 0.6
33,402 + 0.5
33,536 - 0.7
33,559 - 1.7
33,944 + 15107 mRNA_6739 0.21 -0.3
34,016 - 15107 mRNA_6739 0.25 0.3
34,117 + 15107 mRNA_6739 0.30 0.6
34,512 - 15107 mRNA_6739 0.49 0.6
34,851 + 15107 mRNA_6739 0.65 -0.6
34,992 - 15107 mRNA_6739 0.72 0.7
35,015 + 15107 mRNA_6739 0.73 0.9
35,018 - 15107 mRNA_6739 0.73 1.1
35,024 + 15107 mRNA_6739 0.73 -1.2
35,428 + 1.1
35,433 - 0.2
35,450 + 1.0
35,465 + -0.0
35,482 - -0.1
35,483 + -0.7
35,580 - 0.8
35,683 - 0.9
35,757 - 0.5
35,807 - -0.6
35,884 - 0.4
35,900 + -0.5
35,993 - -0.1
36,027 + -2.8
36,063 - -1.1
36,072 - 0.6
36,088 + 0.2
36,165 - -0.1
36,176 - -0.3
36,194 - -0.2
36,209 - 0.2
36,210 + -0.6
36,219 + 0.6
36,223 + 0.1
36,343 + 0.4
36,345 + -0.3
36,346 + 0.2
36,355 + 1.5
36,481 - -0.9
36,485 - 0.9
36,499 + -0.5