Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6733

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6733: 15101 - KOG4412 26S proteasome regulatory complex, subunit PSMD10, at 20964 to 21791 15101 mRNA_6734: 15102 - Hypothetical Protein, at 21925 to 24629 15102

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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19,984 + -1.5
19,992 + 0.3
20,004 - 1.3
20,137 - -0.7
20,171 + -0.6
20,288 + -0.7
20,457 - 2.3
20,539 + -0.1
20,571 + 1.3
20,585 - 0.2
20,586 + -1.5
20,597 - 0.4
20,604 + 0.5
20,604 + 0.2
20,632 + 1.9
20,723 - 0.7
20,735 - 1.0
20,766 + 0.2
20,777 - -1.9
20,786 + 2.2
20,922 + 0.6
21,068 - 15101 mRNA_6733 0.13 0.4
21,083 + 15101 mRNA_6733 0.14 1.2
21,112 + 15101 mRNA_6733 0.18 -2.9
21,192 + 15101 mRNA_6733 0.28 -0.2
21,204 - 15101 mRNA_6733 0.29 -2.4
21,226 + 15101 mRNA_6733 0.32 -1.0
21,348 - 15101 mRNA_6733 0.46 0.4
21,502 - 15101 mRNA_6733 0.65 0.8
21,506 - 15101 mRNA_6733 0.65 0.9
21,934 + 1.1
22,070 + 0.4
22,246 - 15102 mRNA_6734 0.12 1.1
22,246 + 15102 mRNA_6734 0.12 -0.5
22,363 - 15102 mRNA_6734 0.16 0.7
22,588 + 15102 mRNA_6734 0.25 -0.1
22,729 + 15102 mRNA_6734 0.30 -0.5