Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6701

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6700: 15068 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1481002 to 1482828 15068 mRNA_6701: 15069 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1482980 to 1485101 15069 mRNA_6702: 15070 - K08192 DAL MFS transporter, ACS family, allantoate permease, at 1485831 to 1488005 15070

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,482,021 - 15068 mRNA_6700 0.56 1.7
1,482,370 + 15068 mRNA_6700 0.75 -0.5
1,482,661 - 2.7
1,482,668 - 0.7
1,482,686 - 0.5
1,482,802 + 0.9
1,482,812 + 0.3
1,482,815 - -0.2
1,483,046 - -0.1
1,483,054 + -0.0
1,483,056 - -0.7
1,483,112 - -0.5
1,483,296 - 15069 mRNA_6701 0.15 -1.0
1,483,303 - 15069 mRNA_6701 0.15 -2.2
1,483,382 + 15069 mRNA_6701 0.19 0.2
1,483,430 + 15069 mRNA_6701 0.21 -0.8
1,483,686 + 15069 mRNA_6701 0.33 -0.1
1,484,165 + 15069 mRNA_6701 0.56 -0.8
1,484,182 + 15069 mRNA_6701 0.57 -1.4
1,485,028 + -0.4
1,485,182 - -0.3
1,485,461 - 0.2
1,485,462 - -1.1
1,485,513 + -0.4
1,485,515 - 1.7
1,485,550 + -0.9
1,485,557 - -0.1
1,485,562 - 0.3
1,485,566 + -1.0
1,485,580 - -0.2
1,485,591 - -1.4
1,485,611 - -1.6
1,485,612 - 1.3
1,485,727 - -0.0
1,485,906 + -0.5
1,485,917 - -0.3