Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6601

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6600: 14968 - Hypothetical Protein, at 1197421 to 1199600 14968 mRNA_6601: 14969 - K04512 DAAM dishevelled associated activator of morphogenesis, at 1200384 to 1206346 14969 mRNA_6602: 14970 - K07953 SAR1 GTP-binding protein SAR1, at 1206815 to 1208411 14970

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,199,645 - -0.3
1,199,758 + 0.8
1,199,779 - 0.6
1,199,791 - 1.0
1,199,809 - 0.9
1,199,942 + -0.9
1,199,960 - -0.9
1,199,966 + -0.2
1,199,970 - -0.8
1,199,989 + -1.2
1,199,994 - 0.7
1,200,078 - 0.9
1,200,113 + -0.6
1,200,154 + -1.6
1,200,249 - 0.5
1,201,105 - 14969 mRNA_6601 0.12 -0.8
1,201,157 - 14969 mRNA_6601 0.13 -0.1
1,201,754 - 14969 mRNA_6601 0.23 1.2
1,202,049 + 14969 mRNA_6601 0.28 0.3
1,202,330 + 14969 mRNA_6601 0.33 0.7
1,202,772 - 14969 mRNA_6601 0.40 0.4
1,205,914 + 0.5
1,206,472 + 0.4
1,206,566 - 0.2
1,206,570 + -0.7
1,206,683 + -0.4
1,206,770 + 0.3