Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6553

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6553: 14921 - SUPERFAMILY--SSF52266, at 1077741 to 1079727 14921 mRNA_6554: 14922 - K15258 PARP6_8 poly [ADP-ribose] polymerase 6/8, at 1080694 to 1084243 14922

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,077,303 - 0.1
1,077,331 + 0.6
1,077,439 - -0.2
1,077,603 - 1.2
1,077,988 + 14921 mRNA_6553 0.12 3.0
1,079,065 + 14921 mRNA_6553 0.67 3.7
1,079,334 + 14921 mRNA_6553 0.80 3.0
1,079,367 + 14921 mRNA_6553 0.82 1.2
1,079,473 - 14921 mRNA_6553 0.87 4.0
1,079,616 - 3.0
1,079,631 + 3.5
1,079,783 - 0.6
1,079,790 - 0.2
1,079,791 + 0.6
1,079,803 - 0.2
1,079,822 - 1.3
1,079,837 + -0.3
1,079,942 - 0.4
1,079,943 - -0.2
1,079,954 - 2.9
1,079,954 - 1.4
1,079,957 + 2.5
1,079,963 - 0.8
1,079,967 + 0.4
1,079,967 + 2.2
1,079,970 + 0.9
1,079,975 - 1.2
1,079,977 - 0.7
1,079,979 + 0.2
1,080,147 + 0.3
1,080,151 + 1.5
1,080,159 + -1.2
1,080,424 + -0.0
1,080,584 + 0.2