Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6542

Experiments: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6541: 14909 - K14819 DUSP12, YVH1 dual specificity phosphatase 12, at 1034476 to 1036379 14909 mRNA_6542: 14910 - BLAST WSC domain containing protein [Zymoseptoria brevis], at 1036712 to 1039171 14910 mRNA_6543: 14911 - K08712 ABCG2.SNQ2 ATP-binding cassette, subfamily G (WHITE), member 2, SNQ2, at 1039593 to 1046261 14911

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
1,037,621 + 14910 mRNA_6542 0.37 -1.7
1,037,803 + 14910 mRNA_6542 0.44 -1.5
1,037,886 - 14910 mRNA_6542 0.48 1.3
1,038,066 - 14910 mRNA_6542 0.55 -0.4
1,038,371 - 14910 mRNA_6542 0.67 0.3
1,038,377 + 14910 mRNA_6542 0.68 1.1
1,038,519 - 14910 mRNA_6542 0.73 0.4
1,038,520 + 14910 mRNA_6542 0.73 0.3
1,038,522 - 14910 mRNA_6542 0.74 1.5
1,038,530 - 14910 mRNA_6542 0.74 -1.0
1,038,532 - 14910 mRNA_6542 0.74 0.2
1,038,534 + 14910 mRNA_6542 0.74 -0.4
1,038,542 - 14910 mRNA_6542 0.74 0.6
1,038,545 + 14910 mRNA_6542 0.75 -0.8
1,038,551 + 14910 mRNA_6542 0.75 0.3
1,038,552 - 14910 mRNA_6542 0.75 -0.6
1,038,671 - 14910 mRNA_6542 0.80 -1.3
1,038,678 - 14910 mRNA_6542 0.80 -0.0
1,038,679 - 14910 mRNA_6542 0.80 -2.6
1,038,697 + 14910 mRNA_6542 0.81 0.5
1,038,705 + 14910 mRNA_6542 0.81 -0.7
1,038,974 + 0.1
1,038,985 - 0.7
1,038,988 + 0.2
1,038,993 + 0.1
1,039,127 - -1.2
1,039,138 + -2.2
1,039,143 + -0.5
1,039,271 - -0.4
1,039,276 - -1.5
1,039,277 - 0.5
1,039,278 - 0.4
1,039,278 - -0.8
1,039,287 - -0.6
1,039,290 - -0.1
1,039,309 - -0.6
1,039,361 + -0.5
1,039,388 + -0.9
1,039,427 - 0.4
1,039,437 - 0.5
1,039,443 - 0.4
1,039,448 - -1.1
1,040,016 - -1.5