Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6515

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968322 to 969938 14882 mRNA_6515: 14883 - K16578 CLASP1_2 CLIP-associating protein 1/2, at 970088 to 973817 14883 mRNA_6516: 14884 - Hypothetical Protein, at 974162 to 975105 14884

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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969,313 + 14882 mRNA_6514 0.61 -1.4
969,484 - 14882 mRNA_6514 0.72 0.1
969,658 + 14882 mRNA_6514 0.83 0.3
969,767 + 14882 mRNA_6514 0.89 -2.9
969,780 + 3.2
970,112 + 0.9
970,376 - -0.0
970,829 + 14883 mRNA_6515 0.20 1.3
971,209 + 14883 mRNA_6515 0.30 -1.4
971,500 + 14883 mRNA_6515 0.38 0.9
971,802 - 14883 mRNA_6515 0.46 0.0
972,141 + 14883 mRNA_6515 0.55 0.0
972,545 - 14883 mRNA_6515 0.66 -0.3
972,846 - 14883 mRNA_6515 0.74 0.3
973,019 + 14883 mRNA_6515 0.79 0.3
973,425 - 14883 mRNA_6515 0.89 1.5
973,434 + 14883 mRNA_6515 0.90 0.0
973,466 + 0.4
973,570 + 1.3
973,571 + 0.5
973,586 + 0.2
973,602 - 2.2
973,697 - 0.0
973,718 + 0.1
973,723 + 0.8
973,744 - -0.1
973,897 - 0.3
973,913 - 0.0
973,914 + 0.1
974,056 + 1.0
974,063 - 0.1
974,205 + -1.4
974,485 + 14884 mRNA_6516 0.34 -1.6
974,624 + 14884 mRNA_6516 0.49 1.1
974,640 + 14884 mRNA_6516 0.51 0.3