Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6513

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6513: 14881 - HMMPfam-Glycosyl transferase family 90-PF05686,SMART-Putative lipopolysaccharide-modifying enzyme.-SM00672, at 964907 to 967353 14881 mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968322 to 969938 14882

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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963,990 + -0.7
964,433 - -0.6
964,512 - 0.2
964,525 - -1.3
964,759 + -0.3
964,898 - 0.0
964,944 + 3.5
965,232 + 14881 mRNA_6513 0.13 1.9
965,346 + 14881 mRNA_6513 0.18 3.1
965,453 - 14881 mRNA_6513 0.22 2.2
965,495 - 14881 mRNA_6513 0.24 3.1
965,503 - 14881 mRNA_6513 0.24 2.4
965,795 - 14881 mRNA_6513 0.36 1.2
965,796 + 14881 mRNA_6513 0.36 1.9
966,028 + 14881 mRNA_6513 0.46 -1.3
966,469 - 14881 mRNA_6513 0.64 1.9
966,511 - 14881 mRNA_6513 0.66 2.1
966,654 - 14881 mRNA_6513 0.71 1.0
966,661 - 14881 mRNA_6513 0.72 2.3
966,801 - 14881 mRNA_6513 0.77 1.4
967,085 + 14881 mRNA_6513 0.89 2.0
967,092 - 14881 mRNA_6513 0.89 1.8
967,220 + 2.3
967,224 - 2.8
967,232 - 1.2
967,252 - 0.4
967,376 - 0.4
967,386 + 0.7
967,391 - 2.3
967,400 - -0.5
967,415 - 1.3
967,534 - -0.6
967,544 - 0.4
967,544 - 1.3
967,546 - 0.6
967,558 - 1.4
967,569 - -0.3
967,602 + 0.3
967,700 + 2.0
967,705 + -0.8
967,712 - 0.0
967,839 + -0.3
967,979 - -1.4
968,019 + -1.9
968,125 + -0.5
968,270 - 0.5
968,278 - -1.0
968,280 + 0.5