Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6504

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6503: 14871 - K11360 SPT8 transcriptional activator SPT8, at 939011 to 940996 14871 mRNA_6504: 14872 - Hypothetical Protein, at 941388 to 943563 14872 mRNA_6505: 14873 - Hypothetical Protein, at 943993 to 944857 14873

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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940,409 - 14871 mRNA_6503 0.70 0.1
940,415 - 14871 mRNA_6503 0.71 1.7
940,962 + 0.2
940,964 - 1.0
940,998 - -1.7
941,008 + -1.5
941,083 - 0.9
941,085 - 0.2
941,087 - 1.3
941,134 - 1.7
941,140 - 0.1
941,149 + -0.5
941,159 + 0.2
941,159 + 0.2
941,180 - 0.2
941,266 + 1.2
941,284 + -1.7
941,290 + -0.6
941,318 + 0.6
941,430 - 0.4
941,467 - 0.4
941,501 + 0.4
941,603 - 0.1
941,708 + 14872 mRNA_6504 0.15 -0.5
941,773 + 14872 mRNA_6504 0.18 -0.3
942,095 - 14872 mRNA_6504 0.32 0.7
942,217 + 14872 mRNA_6504 0.38 0.2
942,363 + 14872 mRNA_6504 0.45 0.1
942,470 + 14872 mRNA_6504 0.50 -0.2
942,474 - 14872 mRNA_6504 0.50 0.5
942,889 - 14872 mRNA_6504 0.69 -0.6
942,896 + 14872 mRNA_6504 0.69 -0.4
942,930 - 14872 mRNA_6504 0.71 -0.3
943,606 + -1.2
944,075 - 0.4
944,331 + 14873 mRNA_6505 0.39 0.5
944,486 - 14873 mRNA_6505 0.57 -1.0
944,490 - 14873 mRNA_6505 0.57 -0.5
944,511 - 14873 mRNA_6505 0.60 -0.7