Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6497

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6495: 14863 - Hypothetical Protein, at 925916 to 926829 14863 mRNA_6496: 14864 - HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520, at 927095 to 927579 14864 mRNA_6497: 14865 - HMMPfam-Peptidase family M28-PF04389,SUPERFAMILY--SSF53187, at 927670 to 929364 14865 mRNA_6498: 14866 - K00226 pyrD dihydroorotate dehydrogenase (fumarate), at 929512 to 931049 14866

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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926,764 + 0.7
926,780 - 1.0
926,926 + 0.8
927,050 - -0.0
927,079 + 0.4
927,376 + 14864 mRNA_6496 0.58 0.3
927,610 - -0.0
927,610 - -0.1
927,648 + 0.6
927,673 - 0.1
927,677 - 1.3
927,683 - 2.4
927,697 + -1.3
927,823 - 0.4
928,685 + 14865 mRNA_6497 0.60 -0.0
929,115 + 14865 mRNA_6497 0.85 0.0
929,124 - 14865 mRNA_6497 0.86 -1.2
929,137 + 14865 mRNA_6497 0.87 0.2
929,546 - -0.6
929,560 - 0.2
930,001 - 14866 mRNA_6498 0.32 1.2
930,147 + 14866 mRNA_6498 0.41 -2.8