Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6477

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874196 to 881716 14844 mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882440 to 883452 14845 mRNA_6478: 14846 - K15442 TAD3, ADAT3 tRNA-specific adenosine deaminase 3, at 884127 to 886487 14846

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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881,633 + -1.4
881,795 - -0.3
881,906 + -0.5
881,913 - -0.4
881,915 + 0.3
881,916 + -0.5
881,919 + 1.0
881,930 - 1.1
881,942 + 1.4
881,948 + -1.0
881,955 - 1.1
881,958 + 0.3
882,020 - -0.1
882,106 - 2.2
882,111 - -0.3
882,131 + 0.8
882,133 - -0.3
882,173 + 0.3
882,215 + 0.2
882,218 - -2.1
882,224 - -0.2
882,225 - 1.6
882,225 - 0.1
882,227 + 1.6
882,243 + 2.5
882,247 + 1.1
882,282 + -0.7
882,381 + -0.1
882,386 + -0.3
882,529 + 0.5
882,536 - 0.3
882,842 - 14845 mRNA_6477 0.40 0.5
883,129 + 14845 mRNA_6477 0.68 -0.7
883,164 - 14845 mRNA_6477 0.71 0.2
883,172 + 14845 mRNA_6477 0.72 -1.0
883,209 - 14845 mRNA_6477 0.76 -0.6
883,362 + 0.2
883,450 + -0.3
883,578 - -1.2
883,581 + -2.0
883,687 - -1.5
883,898 - 0.5
884,115 - -1.5