Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6473

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6472: 14840 - Hypothetical Protein, at 868009 to 868986 14840 mRNA_6473: 14841 - HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723, at 869282 to 871336 14841 mRNA_6474: 14842 - HMMPfam-Vitamin-D-receptor interacting Mediator subunit 4-PF10018, at 871729 to 872994 14842

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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868,387 - 14840 mRNA_6472 0.39 0.2
868,461 + 14840 mRNA_6472 0.46 0.3
868,470 - 14840 mRNA_6472 0.47 0.2
868,794 - 14840 mRNA_6472 0.80 0.3
868,894 - 0.0
869,057 - 0.2
869,074 + 0.8
869,086 - -1.0
869,215 - -0.7
869,382 + -0.5
869,831 - 14841 mRNA_6473 0.27 0.9
869,941 - 14841 mRNA_6473 0.32 0.7
870,070 - 14841 mRNA_6473 0.38 0.7
870,076 + 14841 mRNA_6473 0.39 1.1
870,199 - 14841 mRNA_6473 0.45 0.4
870,385 + 14841 mRNA_6473 0.54 -1.5
870,511 + 14841 mRNA_6473 0.60 -0.9
871,068 - 14841 mRNA_6473 0.87 -0.6
871,069 + 14841 mRNA_6473 0.87 -1.3
871,165 - -1.3
871,284 - 0.8
871,836 - -0.3
871,982 - 14842 mRNA_6474 0.20 -0.3
872,003 - 14842 mRNA_6474 0.22 1.9