Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6471

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6470: 14838 - Hypothetical Protein, at 864745 to 865870 14838 mRNA_6471: 14839 - KOG0806 Carbon-nitrogen hydrolase, at 866226 to 867912 14839 mRNA_6472: 14840 - Hypothetical Protein, at 868009 to 868986 14840

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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865,302 - 14838 mRNA_6470 0.49 0.4
865,573 - 14838 mRNA_6470 0.74 0.3
865,664 + 14838 mRNA_6470 0.82 -1.1
865,695 + 14838 mRNA_6470 0.84 -0.8
865,760 + 0.7
865,873 + -0.8
866,120 - -0.4
866,129 - 0.8
866,143 - -0.2
866,179 - -1.6
866,273 - 0.3
866,341 + 1.4
866,343 - -0.3
866,344 + 1.2
866,431 + 14839 mRNA_6471 0.12 1.0
866,438 - 14839 mRNA_6471 0.13 0.5
866,438 - 14839 mRNA_6471 0.13 -0.1
866,469 + 14839 mRNA_6471 0.14 1.8
866,608 + 14839 mRNA_6471 0.23 2.5
866,752 - 14839 mRNA_6471 0.31 -0.5
866,769 + 14839 mRNA_6471 0.32 -0.1
867,029 - 14839 mRNA_6471 0.48 -2.6
867,626 - 14839 mRNA_6471 0.83 1.0
867,637 + 14839 mRNA_6471 0.84 1.2
867,693 + 14839 mRNA_6471 0.87 0.9
868,035 + -0.6
868,248 - 14840 mRNA_6472 0.24 1.2
868,387 - 14840 mRNA_6472 0.39 0.2
868,461 + 14840 mRNA_6472 0.46 0.3
868,470 - 14840 mRNA_6472 0.47 0.2
868,794 - 14840 mRNA_6472 0.80 0.3
868,894 - 0.0