Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6465

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6464: 14832 - KOG1609 Protein involved in mRNA turnover and stability, at 845418 to 846912 14832 mRNA_6465: 14833 - Hypothetical Protein, at 847070 to 847704 14833 mRNA_6466: 14834 - Hypothetical Protein, at 848394 to 849782 14834

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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846,116 + 14832 mRNA_6464 0.47 -0.1
846,203 - 14832 mRNA_6464 0.53 1.1
846,484 - 14832 mRNA_6464 0.71 1.0
846,502 - 14832 mRNA_6464 0.73 0.5
846,511 + 14832 mRNA_6464 0.73 1.0
846,635 - 14832 mRNA_6464 0.81 1.4
846,650 - 14832 mRNA_6464 0.82 -0.1
846,653 - 14832 mRNA_6464 0.83 -0.5
846,661 + 14832 mRNA_6464 0.83 0.0
846,675 + 14832 mRNA_6464 0.84 0.4
846,806 + -0.0
846,811 + -1.5
846,828 + 1.2
847,056 + -0.6
847,494 + 14833 mRNA_6465 0.67 0.1
847,494 - 14833 mRNA_6465 0.67 0.7
847,530 + 14833 mRNA_6465 0.72 -0.3
847,575 + 14833 mRNA_6465 0.80 0.1
847,634 + 14833 mRNA_6465 0.89 -0.7
847,820 + 2.2
847,867 - 1.1
847,980 + -2.1
847,993 - -0.6
848,084 + 0.3
848,110 - 1.4
848,135 + 0.5
848,136 - -0.3
848,144 + -4.1
848,271 - 0.2
848,388 - 2.9
848,416 + 0.1
848,430 + -1.6
848,556 - 14834 mRNA_6466 0.12 0.8
848,559 - 14834 mRNA_6466 0.12 2.5
848,650 - 14834 mRNA_6466 0.18 1.0
848,674 - 14834 mRNA_6466 0.20 -1.8