Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6461

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6460: 14828 - K10427 DCTN5 dynactin 5, at 838584 to 839457 14828 mRNA_6461: 14829 - Hypothetical Protein, at 839860 to 840668 14829 mRNA_6462: 14830 - Hypothetical Protein, at 841156 to 842746 14830

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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839,044 - 14828 mRNA_6460 0.53 0.7
839,435 + 0.6
839,621 + 0.0
839,662 - 0.8
839,671 + -2.3
839,771 + 0.8
839,871 + -1.0
840,278 - 14829 mRNA_6461 0.52 0.3
840,303 - 14829 mRNA_6461 0.55 -1.3
840,312 + 14829 mRNA_6461 0.56 -0.8
840,313 - 14829 mRNA_6461 0.56 0.1
840,442 - 14829 mRNA_6461 0.72 0.0
840,455 + 14829 mRNA_6461 0.74 0.6
840,695 + -0.3
840,756 + 0.1
840,857 - 0.4
840,908 - 2.1
840,913 + -0.4
841,029 - 1.8
841,132 - -0.4
841,194 + 0.0
841,197 + -0.0
841,329 + 14830 mRNA_6462 0.11 0.5
841,491 + 14830 mRNA_6462 0.21 0.6
841,631 + 14830 mRNA_6462 0.30 0.2