Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6451

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6450: 14818 - Hypothetical Protein, at 821969 to 822682 14818 mRNA_6451: 14819 - Hypothetical Protein, at 823535 to 824941 14819 mRNA_6452: 14820 - Hypothetical Protein, at 825555 to 826689 14820

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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822,557 - 14818 mRNA_6450 0.82 0.3
822,567 + 14818 mRNA_6450 0.84 -0.1
822,570 - 14818 mRNA_6450 0.84 -0.3
822,583 + 14818 mRNA_6450 0.86 0.9
822,601 + 14818 mRNA_6450 0.89 0.2
822,680 - 0.1
822,689 + 2.5
822,713 - -0.7
822,718 + -2.0
822,830 - 0.7
822,975 - -0.1
823,000 - -0.7
823,292 - -2.2
823,473 + -0.0
823,589 + 0.5
823,747 + 14819 mRNA_6451 0.15 -0.6
824,035 - 14819 mRNA_6451 0.36 -1.0
824,200 + 14819 mRNA_6451 0.47 -1.2
824,201 - 14819 mRNA_6451 0.47 0.1
824,346 - 14819 mRNA_6451 0.58 0.2
824,367 - 14819 mRNA_6451 0.59 -0.7
824,371 + 14819 mRNA_6451 0.59 -1.2
824,435 - 14819 mRNA_6451 0.64 -2.2
824,442 + 14819 mRNA_6451 0.64 -1.4
824,664 - 14819 mRNA_6451 0.80 2.2
824,750 + 14819 mRNA_6451 0.86 0.4
824,765 - 14819 mRNA_6451 0.87 0.1
825,032 + -0.3
825,034 - -0.3
825,037 + -0.4
825,041 - -1.3
825,044 + -0.8
825,129 - 1.4
825,206 + -0.6
825,213 + 0.2
825,223 - 0.2
825,328 + 0.4
825,345 + 2.9
825,345 + -1.2
825,397 - 0.7
825,510 + 0.4
825,510 - -1.1
825,552 - -2.0
825,632 + 0.7
825,665 - 1.8
825,754 - 14820 mRNA_6452 0.18 -1.5
825,782 + 14820 mRNA_6452 0.20 -0.3
825,901 + 14820 mRNA_6452 0.30 -0.1
825,908 - 14820 mRNA_6452 0.31 0.4
825,937 - 14820 mRNA_6452 0.34 1.0