Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6447

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6446: 14814 - Hypothetical Protein, at 814402 to 816229 14814 mRNA_6447: 14815 - Hypothetical Protein, at 816253 to 817256 14815 mRNA_6448: 14816 - HMMPfam-F-box-like-PF12937, at 817584 to 818438 14816

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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815,420 - 14814 mRNA_6446 0.56 0.6
815,438 - 14814 mRNA_6446 0.57 -2.3
815,531 + 14814 mRNA_6446 0.62 -1.0
815,546 - 14814 mRNA_6446 0.63 -0.4
815,566 + 14814 mRNA_6446 0.64 1.1
815,621 + 14814 mRNA_6446 0.67 2.6
815,670 + 14814 mRNA_6446 0.69 0.0
815,680 + 14814 mRNA_6446 0.70 -0.4
815,797 + 14814 mRNA_6446 0.76 1.8
815,823 + 14814 mRNA_6446 0.78 0.1
815,826 - 14814 mRNA_6446 0.78 0.2
815,925 - 14814 mRNA_6446 0.83 0.3
815,928 - 14814 mRNA_6446 0.83 -0.5
815,929 + 14814 mRNA_6446 0.84 0.5
815,930 - 14814 mRNA_6446 0.84 0.7
815,932 - 14814 mRNA_6446 0.84 1.2
816,063 + 0.2
816,069 - 2.2
816,098 + 0.6
816,200 - -0.6
816,580 + 14815 mRNA_6447 0.33 2.1
816,639 + 14815 mRNA_6447 0.38 -0.2
816,944 + 14815 mRNA_6447 0.69 0.3
817,012 + 14815 mRNA_6447 0.76 0.3
817,058 + 14815 mRNA_6447 0.80 0.5
817,060 - 14815 mRNA_6447 0.80 0.4
817,249 - -0.8
817,272 - -0.1
817,393 - 0.2
817,394 - -0.2
817,608 + -0.7
817,744 - 14816 mRNA_6448 0.19 0.2