Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6438

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6437: 14805 - K07511 ECHS1 enoyl-CoA hydratase, at 797925 to 799246 14805 mRNA_6438: 14806 - K15456 KTI12 protein KTI12, at 799617 to 800834 14806 mRNA_6439: 14807 - Hypothetical Protein, at 801024 to 801752 14807

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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798,838 + 14805 mRNA_6437 0.69 -3.0
798,840 - 14805 mRNA_6437 0.69 -3.1
799,103 - 14805 mRNA_6437 0.89 -4.2
799,124 + -1.7
799,161 + -2.8
799,271 - -0.3
799,276 - 0.9
799,414 - 0.2
799,419 - 0.1
799,435 - 0.1
799,435 - -3.5
799,442 + 0.0
799,444 - -0.9
799,449 + 0.4
799,450 + 0.1
799,553 - 1.2
799,565 - 0.8
799,599 + -0.1
799,605 + -0.1
799,616 - -0.3
799,765 + 14806 mRNA_6438 0.12 0.9
799,847 + 14806 mRNA_6438 0.19 0.7
800,546 - 14806 mRNA_6438 0.76 -0.3
800,639 - 14806 mRNA_6438 0.84 0.7
800,921 + 0.3
801,052 + -1.8
801,068 - -0.3
801,238 + 14807 mRNA_6439 0.29 -0.9
801,368 + 14807 mRNA_6439 0.47 2.0
801,457 - 14807 mRNA_6439 0.59 -0.7
801,520 - 14807 mRNA_6439 0.68 1.3
801,559 + 14807 mRNA_6439 0.73 -0.0
801,780 - -2.4
801,826 - 0.0