Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6422

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6420: 14788 - K14263 BNA7 kynurenine formamidase, at 764043 to 765055 14788 mRNA_6421: 14789 - SUPERFAMILY--SSF82199, at 765271 to 766029 14789 mRNA_6422: 14790 - KOG2084 Predicted histone tail methylase containing SET domain, at 766030 to 767975 14790 mRNA_6423: 14791 - Hypothetical Protein, at 768388 to 769029 14791

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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765,047 - 2.8
765,100 - 0.4
765,101 - 2.1
765,124 - 2.6
765,129 + 1.9
765,131 - -0.8
765,132 - -0.1
765,141 - -1.4
765,155 + -2.4
765,251 + 2.0
765,289 + -0.5
765,402 - 14789 mRNA_6421 0.17 -0.5
765,561 - 14789 mRNA_6421 0.38 -0.5
765,684 + 14789 mRNA_6421 0.54 -1.2
765,722 + 14789 mRNA_6421 0.59 -0.3
766,229 - 14790 mRNA_6422 0.10 -2.2
766,555 - 14790 mRNA_6422 0.27 -0.9
766,659 + 14790 mRNA_6422 0.32 -0.5
766,878 + 14790 mRNA_6422 0.44 -0.4
767,143 + 14790 mRNA_6422 0.57 -2.7
767,163 + 14790 mRNA_6422 0.58 0.2
767,234 - 14790 mRNA_6422 0.62 1.0
767,323 + 14790 mRNA_6422 0.66 -2.0
767,352 + 14790 mRNA_6422 0.68 -1.2
767,355 - 14790 mRNA_6422 0.68 -1.2
767,469 + 14790 mRNA_6422 0.74 0.2
767,555 - 14790 mRNA_6422 0.78 -0.2
767,708 - 14790 mRNA_6422 0.86 0.3
767,862 + 0.2
767,863 + 0.3
767,872 + -0.2
768,001 + -0.8
768,116 + 0.5
768,297 + 0.7
768,306 - 0.6
768,312 + 0.4
768,366 + -2.2
768,595 + 14791 mRNA_6423 0.32 0.2