Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6417

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6416: 14784 - Hypothetical Protein, at 757894 to 758331 14784 mRNA_6417: 14785 - Hypothetical Protein, at 758941 to 760073 14785 mRNA_6418: 14786 - K02127 ATPeF0B, ATP5F1, ATP4 F-type H+-transporting ATPase subunit b, at 760341 to 761286 14786

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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757,974 + 14784 mRNA_6416 0.18 0.5
758,117 + 14784 mRNA_6416 0.51 0.2
758,270 + 14784 mRNA_6416 0.86 1.2
758,575 + -0.5
758,586 - 0.2
758,591 - -0.6
758,605 + -1.5
758,605 + 0.9
758,698 - 0.3
758,704 - 1.2
758,891 + -1.8
759,121 + 14785 mRNA_6417 0.16 -0.0
759,141 - 14785 mRNA_6417 0.18 0.4
759,310 - 14785 mRNA_6417 0.33 2.0
759,381 + 14785 mRNA_6417 0.39 2.3
759,568 - 14785 mRNA_6417 0.55 -0.8
759,866 - 14785 mRNA_6417 0.82 0.6
759,875 - 14785 mRNA_6417 0.82 1.8
759,998 - -3.5
760,187 - -1.0
760,275 - -1.0
760,293 - -0.9
760,295 - -2.3
760,296 + -0.5
760,297 - -2.1
760,307 + -1.1
760,307 + -0.9
760,308 - -2.2
760,333 + -3.8