Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6410

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6409: 14777 - KOG2806 Chitinase, at 741880 to 743909 14777 mRNA_6410: 14778 - HMMPfam-Peptidase inhibitor I9-PF05922,SUPERFAMILY--SSF54897, at 744551 to 744938 14778

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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743,594 + 14777 mRNA_6409 0.84 -0.6
743,864 + 0.2
743,964 + 0.3
744,429 - 0.8
744,536 + 0.6
744,559 - 0.0
744,572 - 0.1
744,572 - 0.2
744,728 + 14778 mRNA_6410 0.46 -0.1
744,855 - 14778 mRNA_6410 0.78 1.6
744,868 - 14778 mRNA_6410 0.82 1.6
744,989 - -0.6
744,997 - 0.4
745,000 + 0.6
745,002 - 0.7
745,006 + 0.9
745,008 + -1.9
745,008 - -0.9
745,015 + -0.1
745,022 - 0.2
745,029 + 1.3
745,029 - -0.1
745,036 - -0.9
745,041 - 0.2
745,071 - -0.7
745,168 + 0.0
745,204 + 0.8
745,450 - 2.6
745,617 - 0.5
745,888 - -0.0
745,893 - 1.2
745,907 - 1.5
745,908 - 0.0
745,909 + -0.3
745,922 - 0.0
745,922 - 1.5