Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6409

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6408: 14776 - K19308 BMT6 25S rRNA (uracil2843-N3)-methyltransferase, at 740308 to 741629 14776 mRNA_6409: 14777 - KOG2806 Chitinase, at 741880 to 743909 14777 mRNA_6410: 14778 - HMMPfam-Peptidase inhibitor I9-PF05922,SUPERFAMILY--SSF54897, at 744551 to 744938 14778

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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741,116 + 14776 mRNA_6408 0.61 -0.5
741,148 + 14776 mRNA_6408 0.64 -0.5
741,275 - 14776 mRNA_6408 0.73 0.4
741,645 + 0.5
741,725 - 1.1
741,746 - 0.2
741,792 - 0.6
742,366 + 14777 mRNA_6409 0.24 0.9
742,415 + 14777 mRNA_6409 0.26 0.8
742,605 - 14777 mRNA_6409 0.36 1.8
742,689 - 14777 mRNA_6409 0.40 0.8
742,692 + 14777 mRNA_6409 0.40 -1.0
742,710 + 14777 mRNA_6409 0.41 0.5
742,979 - 14777 mRNA_6409 0.54 -1.5
743,075 + 14777 mRNA_6409 0.59 1.9
743,106 - 14777 mRNA_6409 0.60 -0.4
743,250 - 14777 mRNA_6409 0.67 0.6
743,515 - 14777 mRNA_6409 0.81 0.5
743,594 + 14777 mRNA_6409 0.84 -0.6
743,864 + 0.2
743,964 + 0.3
744,429 - 0.8
744,536 + 0.6
744,559 - 0.0
744,572 - 0.1
744,572 - 0.2
744,728 + 14778 mRNA_6410 0.46 -0.1
744,855 - 14778 mRNA_6410 0.78 1.6
744,868 - 14778 mRNA_6410 0.82 1.6