Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6379

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6378: 14746 - K11884 PNO1, DIM2 RNA-binding protein PNO1, at 675035 to 675906 14746 mRNA_6379: 14747 - Hypothetical Protein, at 676687 to 677946 14747 mRNA_6380: 14748 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 678421 to 679401 14748

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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676,331 + 1.6
676,426 - 0.4
676,436 - -0.3
676,438 - 0.8
676,439 + -0.3
676,443 + 0.2
676,455 + -1.5
676,457 - 0.3
676,463 + -0.3
676,496 - -2.0
676,516 + 0.4
676,596 - 0.3
676,876 - 14747 mRNA_6379 0.15 1.4
676,915 + 14747 mRNA_6379 0.18 0.4
677,335 - 14747 mRNA_6379 0.51 -0.8
677,351 + 14747 mRNA_6379 0.53 0.9
677,766 - 14747 mRNA_6379 0.86 1.0
677,780 - 14747 mRNA_6379 0.87 1.0
677,804 + 14747 mRNA_6379 0.89 -1.1
678,013 + -1.2
678,344 - 0.2
678,345 + -0.3
678,517 - -0.1
678,534 - 14748 mRNA_6380 0.12 -0.1
678,638 - 14748 mRNA_6380 0.22 2.2
678,649 - 14748 mRNA_6380 0.23 0.3
678,675 - 14748 mRNA_6380 0.26 -1.3