Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6347

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6346: 14714 - HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335, at 599677 to 600627 14714 mRNA_6347: 14715 - Hypothetical Protein, at 601204 to 601756 14715 mRNA_6348: 14716 - K11373 ELP1, IKI3, IKBKAP elongator complex protein 1, at 601835 to 607122 14716

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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600,514 + 14714 mRNA_6346 0.88 -0.6
600,514 + 14714 mRNA_6346 0.88 -0.1
600,618 - -0.1
601,040 + -1.1
601,193 + 1.5
601,341 + 14715 mRNA_6347 0.25 0.8
601,464 - 14715 mRNA_6347 0.47 0.1
601,481 + 14715 mRNA_6347 0.50 1.3
601,487 - 14715 mRNA_6347 0.51 1.1
601,649 - 14715 mRNA_6347 0.80 -0.6
601,747 - -0.5
601,761 - 0.4
601,801 + 0.9
601,938 - 0.7
602,339 - 0.6