Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6342

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6341: 14709 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 587053 to 588639 14709 mRNA_6342: 14710 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 588897 to 590459 14710 mRNA_6343: 14711 - K12621 LSM2 U6 snRNA-associated Sm-like protein LSm2, at 590850 to 591445 14711

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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588,725 - -0.4
589,037 - -0.3
589,148 - 14710 mRNA_6342 0.16 0.1
589,148 + 14710 mRNA_6342 0.16 -0.9
589,461 + 14710 mRNA_6342 0.36 -0.4
589,579 + 14710 mRNA_6342 0.44 1.1
589,643 - 14710 mRNA_6342 0.48 -0.6
589,735 + 14710 mRNA_6342 0.54 0.5
589,746 - 14710 mRNA_6342 0.54 -0.2
589,747 + 14710 mRNA_6342 0.54 1.9
589,778 - 14710 mRNA_6342 0.56 0.5
589,961 - 14710 mRNA_6342 0.68 -1.9
590,019 + 14710 mRNA_6342 0.72 -0.5
590,311 + -2.1
590,315 + 1.5
590,331 - -0.7
590,612 + 0.3
590,750 - 0.1
590,906 - -1.0