Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6326

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6325: 14693 - Hypothetical Protein, at 552273 to 554258 14693 mRNA_6326: 14694 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 554507 to 555774 14694 mRNA_6327: 14695 - K13124 MORG1 mitogen-activated protein kinase organizer 1, at 555929 to 557274 14695

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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553,522 - 14693 mRNA_6325 0.63 1.3
553,545 - 14693 mRNA_6325 0.64 -1.2
553,546 + 14693 mRNA_6325 0.64 -0.7
553,546 + 14693 mRNA_6325 0.64 -2.0
553,546 - 14693 mRNA_6325 0.64 -0.3
553,548 - 14693 mRNA_6325 0.64 1.0
553,560 + 14693 mRNA_6325 0.65 2.3
553,582 + 14693 mRNA_6325 0.66 -1.7
553,587 - 14693 mRNA_6325 0.66 -0.2
553,592 - 14693 mRNA_6325 0.66 0.4
553,595 - 14693 mRNA_6325 0.67 -1.7
553,614 - 14693 mRNA_6325 0.68 -1.1
553,623 + 14693 mRNA_6325 0.68 1.2
553,623 + 14693 mRNA_6325 0.68 -0.2
553,629 - 14693 mRNA_6325 0.68 1.3
553,632 + 14693 mRNA_6325 0.68 -0.0
553,634 - 14693 mRNA_6325 0.69 0.5
553,647 - 14693 mRNA_6325 0.69 -0.5
553,652 + 14693 mRNA_6325 0.69 1.3
553,653 + 14693 mRNA_6325 0.69 0.1
553,657 + 14693 mRNA_6325 0.70 2.2
553,661 + 14693 mRNA_6325 0.70 -0.7
553,670 + 14693 mRNA_6325 0.70 0.9
553,673 - 14693 mRNA_6325 0.70 -0.8
553,673 + 14693 mRNA_6325 0.70 0.6
553,687 + 14693 mRNA_6325 0.71 -1.0
553,711 + 14693 mRNA_6325 0.72 -0.7
553,728 + 14693 mRNA_6325 0.73 1.2
553,730 + 14693 mRNA_6325 0.73 1.5
553,740 + 14693 mRNA_6325 0.74 0.2
553,762 + 14693 mRNA_6325 0.75 1.7
553,768 - 14693 mRNA_6325 0.75 1.9
553,774 - 14693 mRNA_6325 0.76 0.1
553,778 + 14693 mRNA_6325 0.76 0.6
553,779 - 14693 mRNA_6325 0.76 0.0
553,785 - 14693 mRNA_6325 0.76 -1.0
553,786 + 14693 mRNA_6325 0.76 -0.2
553,786 + 14693 mRNA_6325 0.76 -0.8
553,791 + 14693 mRNA_6325 0.76 -1.6
553,851 - 14693 mRNA_6325 0.79 0.4
553,866 - 14693 mRNA_6325 0.80 0.6
553,878 - 14693 mRNA_6325 0.81 -0.2
553,895 - 14693 mRNA_6325 0.82 -0.6
553,923 + 14693 mRNA_6325 0.83 0.1
553,934 - 14693 mRNA_6325 0.84 -0.4
553,945 - 14693 mRNA_6325 0.84 2.3
553,963 - 14693 mRNA_6325 0.85 -1.8
553,978 + 14693 mRNA_6325 0.86 0.0
554,030 + 14693 mRNA_6325 0.88 -0.3
554,050 + 14693 mRNA_6325 0.89 0.8
554,055 - 14693 mRNA_6325 0.90 -0.3
554,061 + 0.1
554,072 + 0.8
554,080 + 1.1
554,087 - -0.7
554,105 + -2.5
554,211 + -0.1
554,306 + 0.7
554,331 + 0.3
554,350 - 0.9
554,368 - -2.7
554,369 + -0.3
554,378 + 0.9
554,494 - 0.5
554,502 - -0.1
554,511 + 1.7
554,517 - 0.1
555,351 + 14694 mRNA_6326 0.67 0.5
555,364 - 14694 mRNA_6326 0.68 0.2
555,668 + 0.1
555,679 - -0.3
555,813 + 0.9
555,827 + 0.9
555,844 + -0.7
555,855 - -0.2
555,878 + -0.3
556,083 + 14695 mRNA_6327 0.11 -1.5
556,095 - 14695 mRNA_6327 0.12 -0.7
556,380 + 14695 mRNA_6327 0.34 -0.3
556,687 + 14695 mRNA_6327 0.56 -1.4