Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6321

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6320: 14688 - Hypothetical Protein, at 540621 to 541463 14688 mRNA_6321: 14689 - Hypothetical Protein, at 542148 to 544178 14689 mRNA_6322: 14690 - K09420 MYB myb proto-oncogene protein, at 544392 to 544811 14690

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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541,149 + 14688 mRNA_6320 0.63 -2.2
541,149 - 14688 mRNA_6320 0.63 0.4
541,155 + 14688 mRNA_6320 0.63 -0.8
541,159 + 14688 mRNA_6320 0.64 1.1
541,165 - 14688 mRNA_6320 0.65 0.5
541,171 - 14688 mRNA_6320 0.65 -0.9
541,182 + 14688 mRNA_6320 0.67 -0.3
541,182 - 14688 mRNA_6320 0.67 0.1
541,184 + 14688 mRNA_6320 0.67 -1.0
541,226 + 14688 mRNA_6320 0.72 -0.0
541,234 - 14688 mRNA_6320 0.73 -0.2
541,235 - 14688 mRNA_6320 0.73 0.4
541,237 + 14688 mRNA_6320 0.73 0.2
541,248 + 14688 mRNA_6320 0.74 -1.2
541,250 + 14688 mRNA_6320 0.75 0.7
541,252 - 14688 mRNA_6320 0.75 0.6
541,253 + 14688 mRNA_6320 0.75 0.1
541,264 - 14688 mRNA_6320 0.76 -1.2
541,293 - 14688 mRNA_6320 0.80 1.2
541,295 - 14688 mRNA_6320 0.80 -0.9
541,330 + 14688 mRNA_6320 0.84 1.2
541,332 - 14688 mRNA_6320 0.84 2.0
541,334 - 14688 mRNA_6320 0.85 0.9
541,343 - 14688 mRNA_6320 0.86 0.2
541,348 - 14688 mRNA_6320 0.86 0.7
541,360 - 14688 mRNA_6320 0.88 -0.0
541,371 - 14688 mRNA_6320 0.89 0.5
541,373 + 14688 mRNA_6320 0.89 -0.5
541,380 + 0.1
541,380 + 0.2
541,397 - -2.1
541,405 + 1.0
541,411 - -0.9
541,464 + -1.1
541,476 - 0.0
541,483 + 0.7
541,501 + 1.4
541,510 + 0.9
541,517 - -2.4
541,520 + 0.5
541,525 + -1.8
541,529 - -0.4
541,668 + -0.7
541,670 - 0.9
541,679 + 0.2
541,696 + 1.3
541,713 + 1.2
541,754 - 0.1
541,829 - 0.5
541,833 + 0.6
542,265 - 0.7
542,388 + 14689 mRNA_6321 0.12 1.3
542,552 + 14689 mRNA_6321 0.20 0.8
542,554 - 14689 mRNA_6321 0.20 1.5
542,559 - 14689 mRNA_6321 0.20 0.2
542,714 + 14689 mRNA_6321 0.28 2.2
542,859 + 14689 mRNA_6321 0.35 2.2
543,010 + 14689 mRNA_6321 0.42 1.2
543,577 + 14689 mRNA_6321 0.70 0.6
543,670 + 14689 mRNA_6321 0.75 1.3
544,019 - -0.9
544,021 - 0.7
544,171 - 1.2
544,300 - 2.0
544,595 + 14690 mRNA_6322 0.48 1.3
544,599 + 14690 mRNA_6322 0.49 0.1
544,605 + 14690 mRNA_6322 0.51 1.0
544,611 - 14690 mRNA_6322 0.52 1.6
544,619 + 14690 mRNA_6322 0.54 -0.3
544,751 + 14690 mRNA_6322 0.85 1.4
544,760 - 14690 mRNA_6322 0.88 1.3
544,814 - -0.6
544,877 - 2.3
544,890 - 0.7
545,170 - -0.6