Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6315

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6314: 14682 - K11426 SMYD SET and MYND domain-containing protein, at 525320 to 527665 14682 mRNA_6315: 14683 - K10609 CUL4 cullin 4, at 528215 to 531333 14683 mRNA_6316: 14684 - Hypothetical Protein, at 531577 to 532542 14684

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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527,356 - 14682 mRNA_6314 0.87 -0.6
527,625 + -1.8
527,897 + -0.5
527,902 + 0.3
527,902 - -0.6
527,930 + 0.1
527,943 - -1.7
528,014 + 0.9
528,048 - 0.0
528,227 + -1.0
528,862 + 14683 mRNA_6315 0.21 -2.4
529,826 - 14683 mRNA_6315 0.52 -1.2
530,288 - 14683 mRNA_6315 0.66 -1.7
530,411 + 14683 mRNA_6315 0.70 -0.6
530,730 - 14683 mRNA_6315 0.81 -3.5
530,884 + 14683 mRNA_6315 0.86 0.3
531,001 - 14683 mRNA_6315 0.89 -0.4
531,177 + -0.3
531,297 - -0.6
531,300 + -0.2
531,315 + 2.4
531,465 + 0.0
531,465 + -1.5
531,466 + -1.0
531,466 + 0.4
531,474 + 0.3
531,482 + 0.4
531,483 - 0.0
531,495 - 0.5
531,637 + -0.1
531,654 + -0.2
531,655 - -0.3
531,775 - 14684 mRNA_6316 0.20 0.5
531,804 - 14684 mRNA_6316 0.23 -0.9
531,811 + 14684 mRNA_6316 0.24 -2.2
531,819 + 14684 mRNA_6316 0.25 -1.3
531,943 - 14684 mRNA_6316 0.38 0.8
531,949 - 14684 mRNA_6316 0.39 0.5
531,965 + 14684 mRNA_6316 0.40 2.5
531,979 + 14684 mRNA_6316 0.42 -0.4
531,985 + 14684 mRNA_6316 0.42 -0.9
531,986 + 14684 mRNA_6316 0.42 0.8
532,074 + 14684 mRNA_6316 0.51 -0.7
532,091 + 14684 mRNA_6316 0.53 1.2
532,101 + 14684 mRNA_6316 0.54 -0.8
532,104 - 14684 mRNA_6316 0.55 0.3
532,105 - 14684 mRNA_6316 0.55 0.9
532,108 - 14684 mRNA_6316 0.55 -2.0
532,109 + 14684 mRNA_6316 0.55 -0.4
532,121 + 14684 mRNA_6316 0.56 2.0
532,126 - 14684 mRNA_6316 0.57 0.0
532,129 + 14684 mRNA_6316 0.57 -1.2
532,172 + 14684 mRNA_6316 0.62 -2.0
532,240 - 14684 mRNA_6316 0.69 1.2
532,251 - 14684 mRNA_6316 0.70 0.2
532,251 - 14684 mRNA_6316 0.70 0.9
532,288 + 14684 mRNA_6316 0.74 1.3