Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6271

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6270: 14638 - KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase, at 407745 to 410533 14638 mRNA_6271: 14639 - Hypothetical Protein, at 410534 to 411923 14639

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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409,955 - 14638 mRNA_6270 0.79 0.3
410,165 - 14638 mRNA_6270 0.87 1.1
410,174 + 14638 mRNA_6270 0.87 -0.8
410,301 - 0.2
410,447 - 1.8
410,471 + 1.0
410,476 - 0.5
410,572 + -0.3
410,592 - 0.9
410,599 + 0.6
410,601 + 1.3
410,606 + 0.4
410,607 + 0.8
410,617 - -1.4
410,765 - 14639 mRNA_6271 0.17 -0.4
410,770 - 14639 mRNA_6271 0.17 0.6
410,781 + 14639 mRNA_6271 0.18 1.1
410,781 - 14639 mRNA_6271 0.18 -0.7
410,789 + 14639 mRNA_6271 0.18 -1.4
410,792 + 14639 mRNA_6271 0.19 0.5
410,792 - 14639 mRNA_6271 0.19 -0.1
410,797 - 14639 mRNA_6271 0.19 0.9
410,816 + 14639 mRNA_6271 0.20 1.6
410,925 - 14639 mRNA_6271 0.28 -0.8
410,928 + 14639 mRNA_6271 0.28 2.3
411,080 + 14639 mRNA_6271 0.39 -0.8
411,095 - 14639 mRNA_6271 0.40 1.4
411,106 + 14639 mRNA_6271 0.41 -1.9
411,190 + 14639 mRNA_6271 0.47 1.1
411,233 - 14639 mRNA_6271 0.50 -1.4
411,253 - 14639 mRNA_6271 0.52 0.4
411,254 + 14639 mRNA_6271 0.52 -0.1
411,398 - 14639 mRNA_6271 0.62 -0.1
411,522 - 14639 mRNA_6271 0.71 -3.5
411,527 - 14639 mRNA_6271 0.71 0.0
412,013 - 1.4
412,013 + 0.1