Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6251

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6250: 14618 - Hypothetical Protein, at 355476 to 357206 14618 mRNA_6251: 14619 - KOG4188 Uncharacterized conserved protein, at 357602 to 358776 14619 mRNA_6252: 14620 - K10845 TTDA, GTF2H5, TFB5 TFIIH basal transcription factor complex TTD-A subunit, at 358832 to 359230 14620

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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356,748 - 14618 mRNA_6250 0.73 0.5
357,041 + 2.1
357,080 - 0.7
357,206 + -0.3
357,206 + -1.5
357,775 + 14619 mRNA_6251 0.15 0.6
357,915 + 14619 mRNA_6251 0.27 1.0
358,507 + 14619 mRNA_6251 0.77 0.1
358,679 - 0.8
358,826 - 0.8
359,280 + 2.0
359,321 + 0.3
359,321 + -0.3
359,436 + 0.1
359,550 - -1.0
359,692 + -2.4
359,692 - -0.5