Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6241

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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332,817 - 0.1
332,910 - -2.5
333,145 + -0.4
333,148 - -0.8
333,174 + 0.5
333,260 + -0.2
333,304 - -0.0
333,305 + 0.2
333,315 + 0.7
333,342 - 0.9
333,344 - -0.6
333,354 - -0.3
333,356 + -0.8
333,436 - 0.5
333,469 - -0.0
333,495 + -0.5
333,508 + -0.3
333,557 + -0.4
333,565 + -0.6
333,573 - 0.6
333,578 - 3.0
333,580 - -2.2
333,584 - 2.5
333,590 - 0.2
333,592 - -1.7
333,594 - 1.0
333,600 - 0.3
333,602 + 1.2
333,604 + 1.8
333,606 + 1.3
333,607 + -0.4
333,613 - -0.7
333,619 - 2.7
333,623 - 2.0
333,629 + -0.1
333,629 + 2.0
333,629 + -2.1
333,633 - -0.6
333,643 - -0.1
333,646 + -0.2
333,771 - 0.3
333,772 - -1.4
333,782 - 0.2
333,800 + -0.4
333,808 - 1.6
333,951 - 14609 mRNA_6241 0.22 -0.8
333,961 + 14609 mRNA_6241 0.23 -0.1
333,963 + 14609 mRNA_6241 0.24 -0.3
333,976 - 14609 mRNA_6241 0.25 1.3
334,089 + 14609 mRNA_6241 0.36 -1.0
334,104 - 14609 mRNA_6241 0.38 0.4
334,114 + 14609 mRNA_6241 0.39 0.1
334,261 + 14609 mRNA_6241 0.54 0.3
334,402 + 14609 mRNA_6241 0.69 -0.8
334,534 - 14609 mRNA_6241 0.82 1.3
334,682 + -1.6
334,682 - -1.0
334,705 + 0.4
334,938 + 0.1
335,105 - 0.2
335,214 + -0.2
335,268 - -1.2
335,289 - -1.3
335,292 + -0.0
335,384 + -1.2
335,432 - 0.5
335,433 + -0.9
335,494 + 0.4
335,574 - 14610 mRNA_6242 0.10 -0.7
335,597 + 14610 mRNA_6242 0.11 -2.4