Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6207

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6206: 14574 - K10524 NRK1_2 nicotinamide/nicotinate riboside kinase, at 246520 to 247686 14574 mRNA_6207: 14575 - KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase, at 248249 to 248882 14575 mRNA_6208: 14576 - K00006 GPD1 glycerol-3-phosphate dehydrogenase (NAD+), at 249566 to 251082 14576

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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247,249 - 14574 mRNA_6206 0.62 -0.5
247,733 - 1.4
247,883 - -0.6
247,886 + -3.0
247,890 + 0.2
247,919 + -0.5
247,922 - -0.6
248,176 + 3.8
248,317 - 14575 mRNA_6207 0.11 -0.8
248,344 - 14575 mRNA_6207 0.15 0.7
248,505 + 14575 mRNA_6207 0.40 0.6
248,814 + 14575 mRNA_6207 0.89 -1.0
249,011 - -0.6
249,075 - -0.9
249,078 - -0.3
249,082 + 2.0
249,083 + 0.1
249,195 - 0.8
249,198 + -0.8
249,211 - -0.2
249,227 - 0.7
249,245 - -1.5
249,367 - -0.2
249,368 + -0.1
249,404 - -2.1
249,428 + -0.7
249,506 + 0.4
249,515 + -0.1
249,796 + 14576 mRNA_6208 0.15 0.3