Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6199

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6198: 14566 - BLAST tyrosine kinase domain protein [Rhizoctonia solani AG..., at 229572 to 230681 14566 mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567 mRNA_6200: 14568 - Hypothetical Protein, at 233137 to 235524 14568

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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230,266 + 14566 mRNA_6198 0.63 -0.8
230,345 + 14566 mRNA_6198 0.70 -0.9
230,751 + 0.3
231,043 - -2.9
231,085 - -2.8
231,125 + 14567 mRNA_6199 0.12 -1.5
231,212 - 14567 mRNA_6199 0.17 -2.8
231,310 - 14567 mRNA_6199 0.22 -4.6
231,435 - 14567 mRNA_6199 0.29 -2.4
231,605 + 14567 mRNA_6199 0.38 -1.3
231,896 - 14567 mRNA_6199 0.54 -1.2
231,915 - 14567 mRNA_6199 0.55 -3.5
231,922 + 14567 mRNA_6199 0.56 0.0
232,008 - 14567 mRNA_6199 0.60 -3.8
232,202 - 14567 mRNA_6199 0.71 -3.0
232,335 - 14567 mRNA_6199 0.78 -3.8
232,458 - 14567 mRNA_6199 0.85 -1.4
232,469 - 14567 mRNA_6199 0.86 -0.8
232,478 - 14567 mRNA_6199 0.86 -2.2
232,509 - 14567 mRNA_6199 0.88 -1.0
232,514 - 14567 mRNA_6199 0.88 -1.2
232,597 - -2.8
232,618 + -0.7
232,626 - -1.1
232,637 + -3.3
232,643 - -2.8
232,657 + -2.4
232,783 - 1.6
232,815 + -0.6
232,821 + -0.2
232,953 - -0.8
233,105 - -1.3