Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6198

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6197: 14565 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 227158 to 229573 14565 mRNA_6198: 14566 - BLAST tyrosine kinase domain protein [Rhizoctonia solani AG..., at 229572 to 230681 14566 mRNA_6199: 14567 - HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112, at 230911 to 232731 14567

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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229,579 - 1.3
229,586 + 1.2
229,592 + -0.4
229,596 - 1.0
229,747 + 14566 mRNA_6198 0.16 0.0
229,752 - 14566 mRNA_6198 0.16 0.2
229,767 + 14566 mRNA_6198 0.18 1.6
229,863 + 14566 mRNA_6198 0.26 -1.4
230,266 + 14566 mRNA_6198 0.63 -0.8
230,345 + 14566 mRNA_6198 0.70 -0.9
230,751 + 0.3
231,043 - -2.9
231,085 - -2.8
231,125 + 14567 mRNA_6199 0.12 -1.5
231,212 - 14567 mRNA_6199 0.17 -2.8
231,310 - 14567 mRNA_6199 0.22 -4.6
231,435 - 14567 mRNA_6199 0.29 -2.4
231,605 + 14567 mRNA_6199 0.38 -1.3