Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6192

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559 mRNA_6192: 14560 - Hypothetical Protein, at 219520 to 220950 14560 mRNA_6193: 14561 - Hypothetical Protein, at 221060 to 222668 14561

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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218,752 + -1.2
219,011 - 0.2
219,135 + 1.0
219,142 - 1.1
219,151 + 0.7
219,156 + 0.6
219,157 - 0.0
219,161 - 0.2
219,161 - -0.4
219,175 - -2.3
219,179 + -2.2
219,188 + -1.6
219,210 - -0.0
219,216 + -0.1
219,228 + -2.2
219,229 + -0.3
219,232 + -0.8
219,288 + -0.1
219,290 + 1.1
219,320 - -2.0
219,328 + 1.0
219,486 + 0.4
219,617 - 2.1
219,654 - -0.4
219,664 + 14560 mRNA_6192 0.10 -1.0
219,775 + 14560 mRNA_6192 0.18 -0.7
219,795 - 14560 mRNA_6192 0.19 0.2
220,359 - 14560 mRNA_6192 0.59 -1.8
220,407 + 14560 mRNA_6192 0.62 1.6
220,931 - -0.6
220,942 + 0.3
221,000 + -0.4
221,130 - -1.9
221,235 - 14561 mRNA_6193 0.11 0.3
221,246 + 14561 mRNA_6193 0.12 2.4
221,496 - 14561 mRNA_6193 0.27 -1.3
221,814 + 14561 mRNA_6193 0.47 0.6