Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6152

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6151: 14519 - Hypothetical Protein, at 124674 to 126819 14519 mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127167 to 130520 14520 mRNA_6153: 14521 - K00757 udp, UPP uridine phosphorylase, at 131341 to 132602 14521

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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126,269 - 14519 mRNA_6151 0.74 0.3
126,332 + 14519 mRNA_6151 0.77 0.5
126,435 - 14519 mRNA_6151 0.82 0.1
126,460 + 14519 mRNA_6151 0.83 -1.5
126,465 - 14519 mRNA_6151 0.83 1.4
126,597 - 14519 mRNA_6151 0.90 -1.1
126,733 - 0.0
126,734 - 0.4
126,744 - -0.4
126,750 + -1.4
126,757 - -0.3
126,868 + 1.1
126,879 + -2.1
127,015 - 0.1
127,040 + -0.4
127,191 + 0.6
127,202 - -1.2
128,021 + 14520 mRNA_6152 0.25 -0.2
128,053 - 14520 mRNA_6152 0.26 -2.4
128,199 - 14520 mRNA_6152 0.31 0.4
128,936 + 14520 mRNA_6152 0.53 -2.9
130,249 - -2.5
130,854 + -1.8
130,888 - 0.9
130,889 + -1.1
131,021 + -0.4
131,152 - 0.9
131,169 + 0.1