Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6151

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6150: 14518 - KOG3399 Predicted Yippee-type zinc-binding protein, at 123821 to 124477 14518 mRNA_6151: 14519 - Hypothetical Protein, at 124674 to 126819 14519 mRNA_6152: 14520 - HMMPfam-Slx4 endonuclease-PF09494, at 127167 to 130520 14520

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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123,676 + 0.0
123,731 + 0.8
123,850 + -1.2
124,038 + 14518 mRNA_6150 0.33 -0.4
124,102 + 14518 mRNA_6150 0.43 0.3
124,299 + 14518 mRNA_6150 0.73 0.6
124,382 - 14518 mRNA_6150 0.85 0.4
124,392 - 14518 mRNA_6150 0.87 0.7
124,531 - 0.9
124,573 + 1.1
124,676 - -1.7
124,700 + 0.3
124,707 - -0.9
125,151 - 14519 mRNA_6151 0.22 -1.0
125,318 + 14519 mRNA_6151 0.30 -0.2
125,886 + 14519 mRNA_6151 0.56 -0.9
125,910 + 14519 mRNA_6151 0.58 0.5
126,269 - 14519 mRNA_6151 0.74 0.3
126,332 + 14519 mRNA_6151 0.77 0.5
126,435 - 14519 mRNA_6151 0.82 0.1
126,460 + 14519 mRNA_6151 0.83 -1.5
126,465 - 14519 mRNA_6151 0.83 1.4
126,597 - 14519 mRNA_6151 0.90 -1.1
126,733 - 0.0
126,734 - 0.4
126,744 - -0.4
126,750 + -1.4
126,757 - -0.3
126,868 + 1.1
126,879 + -2.1
127,015 - 0.1
127,040 + -0.4
127,191 + 0.6
127,202 - -1.2