Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6129

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6128: 14496 - BLAST DEHA2B11858p [Debaryomyces hansenii CBS767], at 70896 to 71507 14496 mRNA_6129: 14497 - Hypothetical Protein, at 71681 to 73838 14497 mRNA_6130: 14498 - K11786 STH1_SNF2 ATP-dependent helicase STH1/SNF2, at 73930 to 78529 14498

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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70,720 - -3.2
70,828 + 0.7
70,837 - -0.1
70,846 - 1.0
70,999 + 14496 mRNA_6128 0.17 0.6
71,031 + 14496 mRNA_6128 0.22 0.5
71,151 + 14496 mRNA_6128 0.42 -1.4
71,296 + 14496 mRNA_6128 0.65 -0.4
71,420 - 14496 mRNA_6128 0.86 -0.6
71,440 + 14496 mRNA_6128 0.89 0.7
71,443 - 14496 mRNA_6128 0.89 -0.3
71,451 + -0.5
71,470 + -0.5
71,560 + 1.2
71,884 + -2.1
72,444 + 14497 mRNA_6129 0.35 -1.8
72,727 + 14497 mRNA_6129 0.48 -0.1
73,080 - 14497 mRNA_6129 0.65 0.9
73,152 - 14497 mRNA_6129 0.68 -0.9
73,165 - 14497 mRNA_6129 0.69 1.0
73,449 + 14497 mRNA_6129 0.82 -0.4
73,588 - 14497 mRNA_6129 0.88 -3.1
73,730 - 0.5
73,752 + 1.3
73,882 + -0.4
73,902 + 1.1
73,902 - -0.8
73,907 - 0.7
73,911 + 0.1
73,915 + 0.1
73,922 + -1.2
73,922 - -1.2