Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6114

Experiments: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6113: 14481 - K17263 CAND1 cullin-associated NEDD8-dissociated protein 1, at 19972 to 24805 14481 mRNA_6114: 14482 - Hypothetical Protein, at 25220 to 26095 14482 mRNA_6115: 14483 - Hypothetical Protein, at 26459 to 27455 14483

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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24,221 - 14481 mRNA_6113 0.88 0.1
24,280 + 14481 mRNA_6113 0.89 1.0
24,283 - 14481 mRNA_6113 0.89 1.3
24,327 + -0.6
24,337 - -0.9
24,337 - -0.5
24,344 + 0.2
24,392 - 0.6
24,441 + -3.0
24,495 - -1.7
24,552 - -0.2
24,555 + 0.3
24,639 + 0.2
24,665 - 1.2
24,666 - 0.3
24,805 + -0.4
25,098 + 0.5
25,124 - 0.8
25,227 + -0.8
25,495 + 14482 mRNA_6114 0.31 1.0
25,675 + 14482 mRNA_6114 0.52 -0.8
25,801 - 14482 mRNA_6114 0.66 0.5
26,028 - -1.2
26,111 - 0.1
26,132 - 1.7
26,139 + -0.0
26,438 + 0.2
26,739 + 14483 mRNA_6115 0.28 1.0
26,741 - 14483 mRNA_6115 0.28 0.7
26,865 + 14483 mRNA_6115 0.41 -0.6
26,871 - 14483 mRNA_6115 0.41 -0.7
26,872 + 14483 mRNA_6115 0.41 -0.1
26,877 - 14483 mRNA_6115 0.42 0.9
26,898 + 14483 mRNA_6115 0.44 1.0
26,996 - 14483 mRNA_6115 0.54 -0.2
27,001 - 14483 mRNA_6115 0.54 0.3
27,004 - 14483 mRNA_6115 0.55 -3.0
27,009 - 14483 mRNA_6115 0.55 -1.0
27,058 - 14483 mRNA_6115 0.60 0.7